Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.81■□□□□ 0.6
CHMP2AO43633 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP2AO43633 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP2AO43633 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP2AO43633 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP2AO43633 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP2AO43633 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHMP2AO43633 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHMP2AO43633 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CHMP2AO43633 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP2AO43633 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 AC106886.4-201ENST00000623557 2502 ntBASIC18.8■□□□□ 0.6
CHMP2AO43633 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CHMP2AO43633 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CHMP2AO43633 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMP2AO43633 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CHMP2AO43633 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP2AO43633 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.8■□□□□ 0.6
CHMP2AO43633 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP2AO43633 ACTG1P14-201ENST00000446382 1122 ntBASIC18.8■□□□□ 0.6
CHMP2AO43633 TIMM8BP1-201ENST00000452384 211 ntBASIC18.8■□□□□ 0.6
CHMP2AO43633 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMP2AO43633 AC013467.2-201ENST00000605472 835 ntBASIC18.8■□□□□ 0.6
CHMP2AO43633 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP2AO43633 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHMP2AO43633 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP2AO43633 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 UBALD1-205ENST00000590891 2641 ntBASIC18.8■□□□□ 0.6
CHMP2AO43633 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP2AO43633 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMP2AO43633 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2AO43633 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CHMP2AO43633 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP2AO43633 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP2AO43633 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP2AO43633 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP2AO43633 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP2AO43633 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP2AO43633 SNX33P1-201ENST00000592116 1762 ntBASIC18.79■□□□□ 0.6
CHMP2AO43633 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CHMP2AO43633 AC079328.2-201ENST00000561241 3354 ntBASIC18.79■□□□□ 0.6
CHMP2AO43633 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
CHMP2AO43633 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 AL671277.1-201ENST00000429656 993 ntBASIC18.79■□□□□ 0.6
CHMP2AO43633 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP2AO43633 SNHG9-202ENST00000564014 471 ntBASIC18.79■□□□□ 0.6
CHMP2AO43633 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
CHMP2AO43633 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP2AO43633 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CHMP2AO43633 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP2AO43633 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CHMP2AO43633 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHMP2AO43633 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CHMP2AO43633 AC078925.2-201ENST00000624013 1973 ntBASIC18.79■□□□□ 0.6
CHMP2AO43633 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHMP2AO43633 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2AO43633 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP2AO43633 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP2AO43633 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP2AO43633 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHMP2AO43633 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP2AO43633 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms