Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AL671710.1-201ENST00000610245 2349 ntBASIC18.28■□□□□ 0.52
CLDN3O15551 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.28■□□□□ 0.52
CLDN3O15551 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN3O15551 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN3O15551 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN3O15551 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN3O15551 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN3O15551 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN3O15551 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN3O15551 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CLDN3O15551 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLDN3O15551 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.27■□□□□ 0.52
CLDN3O15551 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN3O15551 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN3O15551 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN3O15551 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN3O15551 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN3O15551 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN3O15551 CEND1P1-201ENST00000451006 455 ntBASIC18.27■□□□□ 0.52
CLDN3O15551 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN3O15551 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLDN3O15551 AC109635.5-201ENST00000533593 962 ntBASIC18.27■□□□□ 0.52
CLDN3O15551 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN3O15551 MIR3909-201ENST00000579518 119 ntBASIC18.27■□□□□ 0.52
CLDN3O15551 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.27■□□□□ 0.52
CLDN3O15551 GPALPP1-207ENST00000611650 899 ntBASIC18.27■□□□□ 0.52
CLDN3O15551 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN3O15551 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN3O15551 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CLDN3O15551 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLDN3O15551 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN3O15551 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN3O15551 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN3O15551 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CLDN3O15551 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN3O15551 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN3O15551 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
CLDN3O15551 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN3O15551 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
CLDN3O15551 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN3O15551 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLDN3O15551 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CLDN3O15551 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN3O15551 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN3O15551 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CLDN3O15551 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 AC211486.1-202ENST00000416371 468 ntBASIC18.26■□□□□ 0.51
CLDN3O15551 AC092474.2-201ENST00000424288 719 ntBASIC18.26■□□□□ 0.51
CLDN3O15551 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN3O15551 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 AC211476.1-201ENST00000503899 468 ntBASIC18.26■□□□□ 0.51
CLDN3O15551 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN3O15551 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN3O15551 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN3O15551 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN3O15551 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN3O15551 AL139011.1-202ENST00000642063 584 ntBASIC18.26■□□□□ 0.51
CLDN3O15551 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CLDN3O15551 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLDN3O15551 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN3O15551 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN3O15551 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CLDN3O15551 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN3O15551 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLDN3O15551 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN3O15551 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN3O15551 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN3O15551 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN3O15551 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLDN3O15551 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLDN3O15551 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.25■□□□□ 0.51
CLDN3O15551 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN3O15551 AGGF1P2-201ENST00000426656 2106 ntBASIC18.25■□□□□ 0.51
CLDN3O15551 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN3O15551 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.25■□□□□ 0.51
CLDN3O15551 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN3O15551 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLDN3O15551 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CLDN3O15551 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN3O15551 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.25■□□□□ 0.51
CLDN3O15551 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN3O15551 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN3O15551 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN3O15551 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.25■□□□□ 0.51
CLDN3O15551 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms