Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 WASH6P-202ENST00000359512 1437 ntBASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC124067.4-201ENST00000519691 2379 ntBASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC016027.1-202ENST00000607927 1699 ntBASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC005052.1-201ENST00000625181 2492 ntBASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 YBX2P1-201ENST00000394192 760 ntBASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 ADH5P3-201ENST00000433842 1137 ntBASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 POU5F1P6-201ENST00000466990 990 ntBASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 MTDHP5-201ENST00000598980 586 ntBASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC092902.6-201ENST00000641783 218 ntBASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-4A0A0C4DH59 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRBV5-4A0A0C4DH59 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRBV5-4A0A0C4DH59 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 FAM58CP-201ENST00000435741 640 ntBASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 C20orf181-201ENST00000623918 480 ntBASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-4A0A0C4DH59 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms