Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 AL645939.2-201ENST00000427340 991 ntBASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 CYMP-203ENST00000474680 1263 ntBASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 AC016396.2-201ENST00000562575 1417 ntBASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA6Q9Y5G7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 FAM58CP-201ENST00000435741 640 ntBASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA6Q9Y5G7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 AC005915.1-201ENST00000624912 2018 ntBASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA6Q9Y5G7 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms