Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.28■□□□□ 0.36
HCFC1R1Q9NWW0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HCFC1R1Q9NWW0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HCFC1R1Q9NWW0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 AC009477.1-201ENST00000452936 217 ntBASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 RNA5SP410-201ENST00000516285 106 ntBASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 AL596325.1-201ENST00000563991 1082 ntBASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 AL589739.1-201ENST00000607720 493 ntBASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
HCFC1R1Q9NWW0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
HCFC1R1Q9NWW0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
HCFC1R1Q9NWW0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HCFC1R1Q9NWW0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HCFC1R1Q9NWW0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HCFC1R1Q9NWW0 AL035456.1-201ENST00000456064 1369 ntBASIC17.27■□□□□ 0.35
HCFC1R1Q9NWW0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HCFC1R1Q9NWW0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HCFC1R1Q9NWW0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 AC138932.1-201ENST00000534164 6830 ntBASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 RN7SL692P-201ENST00000464677 288 ntBASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 AL844908.2-201ENST00000609461 460 ntBASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 CETN4P-206ENST00000642099 2168 ntBASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.26■□□□□ 0.35
HCFC1R1Q9NWW0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 KRT8P39-201ENST00000396270 1433 ntBASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 AC098859.1-201ENST00000502915 1238 ntBASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms