Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 LINC00982-205ENST00000420957 435 ntBASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 PRYP5-201ENST00000451909 266 ntBASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 SART3-203ENST00000546611 1184 ntBASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 AL022326.1-202ENST00000641533 845 ntBASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 ALOX12P2-203ENST00000570921 1945 ntBASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 ACTG1P4-201ENST00000425123 1122 ntBASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTPS2Q9NRF8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTPS2Q9NRF8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms