Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AL645728.2-201ENST00000641974 660 ntBASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRDM9Q9NQV7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 KRT8P39-201ENST00000396270 1433 ntBASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 NKILA-202ENST00000614771 2598 ntBASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 PDPK2P-202ENST00000562415 1191 ntBASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 MIR4515-201ENST00000584082 81 ntBASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 AL513190.1-201ENST00000621254 727 ntBASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 AC022726.2-201ENST00000634673 547 ntBASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 AC092865.6-201ENST00000642101 219 ntBASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 AC124067.4-201ENST00000519691 2379 ntBASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRDM9Q9NQV7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 SLC22A20-204ENST00000530038 1673 ntBASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 BX842568.4-201ENST00000421222 227 ntBASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 AL031432.2-201ENST00000566714 459 ntBASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 AL928711.1-201ENST00000570165 459 ntBASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 MIR3909-201ENST00000579518 119 ntBASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms