Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 PCGF3-213ENST00000620529 1899 ntBASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCSER1Q9C0I3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCSER1Q9C0I3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CCSER1Q9C0I3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CCSER1Q9C0I3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 AL662844.4-201ENST00000606367 2838 ntBASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 AL590627.1-203ENST00000421194 1026 ntBASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 AL031055.1-201ENST00000606362 631 ntBASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 LINC01144-201ENST00000626198 1710 ntBASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCSER1Q9C0I3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 MTHFR-217ENST00000641820 1569 ntBASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 PMS2P4-201ENST00000412466 1052 ntBASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 AC064836.3-201ENST00000607928 673 ntBASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 AC020765.3-201ENST00000613051 740 ntBASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 AC092364.2-201ENST00000596710 2692 ntBASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.69■□□□□ 0.58
CCSER1Q9C0I3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 AL022342.1-201ENST00000400363 863 ntBASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 AP000347.1-202ENST00000435868 847 ntBASIC18.68■□□□□ 0.58
CCSER1Q9C0I3 KRT18P2-201ENST00000447938 1258 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms