Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 AC023274.1-201ENST00000418278 595 ntBASIC14.05□□□□□ -0.16
CCL13Q99616 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL13Q99616 RHOQP3-201ENST00000437982 621 ntBASIC14.05□□□□□ -0.16
CCL13Q99616 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL13Q99616 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
CCL13Q99616 AC087641.1-201ENST00000557561 1021 ntBASIC14.05□□□□□ -0.16
CCL13Q99616 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.05□□□□□ -0.16
CCL13Q99616 AL671883.3-201ENST00000603274 991 ntBASIC14.05□□□□□ -0.16
CCL13Q99616 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.05□□□□□ -0.16
CCL13Q99616 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CCL13Q99616 AP001350.2-201ENST00000625104 1094 ntBASIC14.05□□□□□ -0.16
CCL13Q99616 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CCL13Q99616 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CCL13Q99616 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL13Q99616 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL13Q99616 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL13Q99616 AC025580.3-201ENST00000617932 1424 ntBASIC14.05□□□□□ -0.16
CCL13Q99616 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL13Q99616 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CCL13Q99616 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CCL13Q99616 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCL13Q99616 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL13Q99616 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCL13Q99616 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL13Q99616 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL13Q99616 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCL13Q99616 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCL13Q99616 NKILA-202ENST00000614771 2598 ntBASIC14.04□□□□□ -0.16
CCL13Q99616 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL13Q99616 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.04□□□□□ -0.16
CCL13Q99616 AC078925.2-201ENST00000624013 1973 ntBASIC14.04□□□□□ -0.16
CCL13Q99616 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL13Q99616 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL13Q99616 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL13Q99616 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL13Q99616 HCG4-201ENST00000418983 998 ntBASIC14.04□□□□□ -0.16
CCL13Q99616 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL13Q99616 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL13Q99616 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CCL13Q99616 MIR4492-201ENST00000581627 80 ntBASIC14.04□□□□□ -0.16
CCL13Q99616 MIR4515-201ENST00000584082 81 ntBASIC14.04□□□□□ -0.16
CCL13Q99616 CYP2A7P1-201ENST00000595391 815 ntBASIC14.04□□□□□ -0.16
CCL13Q99616 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.04□□□□□ -0.16
CCL13Q99616 AL513190.1-201ENST00000621254 727 ntBASIC14.04□□□□□ -0.16
CCL13Q99616 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL13Q99616 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CCL13Q99616 PMS2P7-201ENST00000506558 1336 ntBASIC14.04□□□□□ -0.16
CCL13Q99616 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CCL13Q99616 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL13Q99616 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL13Q99616 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCL13Q99616 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL13Q99616 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CCL13Q99616 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.04□□□□□ -0.16
CCL13Q99616 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.04□□□□□ -0.16
CCL13Q99616 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL13Q99616 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CCL13Q99616 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL13Q99616 LINC00895-201ENST00000629028 1637 ntBASIC14.04□□□□□ -0.16
CCL13Q99616 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL13Q99616 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CCL13Q99616 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL13Q99616 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL13Q99616 AC079328.2-201ENST00000561241 3354 ntBASIC14.03□□□□□ -0.16
CCL13Q99616 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL13Q99616 AL603756.1-201ENST00000606511 2163 ntBASIC14.03□□□□□ -0.16
CCL13Q99616 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCL13Q99616 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL13Q99616 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL13Q99616 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL13Q99616 AC011676.5-201ENST00000624864 2660 ntBASIC14.03□□□□□ -0.16
CCL13Q99616 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL13Q99616 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL13Q99616 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL13Q99616 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CCL13Q99616 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL13Q99616 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCL13Q99616 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL13Q99616 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CCL13Q99616 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL13Q99616 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL13Q99616 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms