Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF217Q8TC41 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF217Q8TC41 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
RNF217Q8TC41 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RNF217Q8TC41 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF217Q8TC41 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF217Q8TC41 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF217Q8TC41 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
RNF217Q8TC41 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF217Q8TC41 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF217Q8TC41 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF217Q8TC41 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF217Q8TC41 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF217Q8TC41 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF217Q8TC41 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF217Q8TC41 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
RNF217Q8TC41 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RNF217Q8TC41 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF217Q8TC41 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF217Q8TC41 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF217Q8TC41 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RNF217Q8TC41 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF217Q8TC41 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF217Q8TC41 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF217Q8TC41 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF217Q8TC41 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RNF217Q8TC41 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RNF217Q8TC41 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF217Q8TC41 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
RNF217Q8TC41 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF217Q8TC41 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF217Q8TC41 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF217Q8TC41 HLA-F-220ENST00000434407 884 ntBASIC16.27■□□□□ 0.2
RNF217Q8TC41 HOMER2P1-201ENST00000455653 964 ntBASIC16.27■□□□□ 0.2
RNF217Q8TC41 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF217Q8TC41 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF217Q8TC41 AC012306.2-201ENST00000609350 630 ntBASIC16.27■□□□□ 0.2
RNF217Q8TC41 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF217Q8TC41 AC106886.4-201ENST00000623557 2502 ntBASIC16.27■□□□□ 0.2
RNF217Q8TC41 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF217Q8TC41 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF217Q8TC41 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF217Q8TC41 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF217Q8TC41 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF217Q8TC41 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF217Q8TC41 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF217Q8TC41 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF217Q8TC41 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF217Q8TC41 AP002414.2-201ENST00000591780 3365 ntBASIC16.27■□□□□ 0.19
RNF217Q8TC41 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF217Q8TC41 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RNF217Q8TC41 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF217Q8TC41 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF217Q8TC41 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.27■□□□□ 0.19
RNF217Q8TC41 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.27■□□□□ 0.19
RNF217Q8TC41 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 KRT8P47-201ENST00000604727 1398 ntBASIC16.26■□□□□ 0.19
RNF217Q8TC41 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 MIR1224-201ENST00000408193 85 ntBASIC16.26■□□□□ 0.19
RNF217Q8TC41 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 KRT18P38-201ENST00000449496 1282 ntBASIC16.26■□□□□ 0.19
RNF217Q8TC41 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 KRT18P21-201ENST00000515767 1272 ntBASIC16.26■□□□□ 0.19
RNF217Q8TC41 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 AC009154.2-201ENST00000621177 724 ntBASIC16.26■□□□□ 0.19
RNF217Q8TC41 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF217Q8TC41 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF217Q8TC41 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms