Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC82Q8N4S0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC82Q8N4S0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC82Q8N4S0 PCDHA14-201ENST00000506751 2298 ntBASIC19.55■□□□□ 0.72
CCDC82Q8N4S0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CCDC82Q8N4S0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC82Q8N4S0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC82Q8N4S0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC82Q8N4S0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC82Q8N4S0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC82Q8N4S0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC82Q8N4S0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 KRT19P2-202ENST00000557173 1012 ntBASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 MIR4492-201ENST00000581627 80 ntBASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 AC023141.13-201ENST00000604991 943 ntBASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 AC012569.1-201ENST00000591191 1524 ntBASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC82Q8N4S0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 PMS2P7-201ENST00000506558 1336 ntBASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC82Q8N4S0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 HMGA1P7-201ENST00000406908 502 ntBASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 AC091167.2-201ENST00000579581 588 ntBASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 MIR4515-201ENST00000584082 81 ntBASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 CYP2A7P1-201ENST00000595391 815 ntBASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 AC007064.4-201ENST00000637740 555 ntBASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC82Q8N4S0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.52■□□□□ 0.71
CCDC82Q8N4S0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC82Q8N4S0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC82Q8N4S0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC82Q8N4S0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC82Q8N4S0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC82Q8N4S0 LINC00895-201ENST00000629028 1637 ntBASIC19.51■□□□□ 0.71
CCDC82Q8N4S0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms