Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CHD1LQ86WJ1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 AL031008.1-201ENST00000619963 541 ntBASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 PGM5P2-202ENST00000637225 1043 ntBASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD1LQ86WJ1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 AC108073.2-201ENST00000464002 357 ntBASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 AC104692.2-201ENST00000603054 253 ntBASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 AC004790.2-201ENST00000623588 572 ntBASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 AC005593.1-201ENST00000624894 515 ntBASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHD1LQ86WJ1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 GPAA1P2-202ENST00000606848 1787 ntBASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 HCG4-201ENST00000418983 998 ntBASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHD1LQ86WJ1 AL049840.3-201ENST00000602669 611 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms