Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
USP46P62068 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP46P62068 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
USP46P62068 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
USP46P62068 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
USP46P62068 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP46P62068 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP46P62068 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP46P62068 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP46P62068 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP46P62068 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP46P62068 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP46P62068 AL139400.1-201ENST00000366220 510 ntBASIC17.62■□□□□ 0.41
USP46P62068 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP46P62068 TFAMP1-201ENST00000412727 736 ntBASIC17.62■□□□□ 0.41
USP46P62068 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
USP46P62068 AC092474.2-201ENST00000424288 719 ntBASIC17.62■□□□□ 0.41
USP46P62068 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
USP46P62068 AC243562.1-201ENST00000560672 389 ntBASIC17.62■□□□□ 0.41
USP46P62068 AC093520.2-201ENST00000561830 333 ntBASIC17.62■□□□□ 0.41
USP46P62068 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.62■□□□□ 0.41
USP46P62068 AC027796.2-201ENST00000575326 344 ntBASIC17.62■□□□□ 0.41
USP46P62068 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
USP46P62068 AC004835.2-201ENST00000603762 682 ntBASIC17.62■□□□□ 0.41
USP46P62068 AL031055.1-201ENST00000606362 631 ntBASIC17.62■□□□□ 0.41
USP46P62068 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.62■□□□□ 0.41
USP46P62068 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.62■□□□□ 0.41
USP46P62068 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.62■□□□□ 0.41
USP46P62068 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.62■□□□□ 0.41
USP46P62068 PCDHB17P-201ENST00000539533 2393 ntBASIC17.62■□□□□ 0.41
USP46P62068 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP46P62068 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP46P62068 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.62■□□□□ 0.41
USP46P62068 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
USP46P62068 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
USP46P62068 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.62■□□□□ 0.41
USP46P62068 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
USP46P62068 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
USP46P62068 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.61■□□□□ 0.41
USP46P62068 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
USP46P62068 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
USP46P62068 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
USP46P62068 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 AC109635.5-201ENST00000533593 962 ntBASIC17.61■□□□□ 0.41
USP46P62068 AL135744.1-201ENST00000565098 629 ntBASIC17.61■□□□□ 0.41
USP46P62068 RARRES2P8-201ENST00000566335 367 ntBASIC17.61■□□□□ 0.41
USP46P62068 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.61■□□□□ 0.41
USP46P62068 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
USP46P62068 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
USP46P62068 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
USP46P62068 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
USP46P62068 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.61■□□□□ 0.41
USP46P62068 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.61■□□□□ 0.41
USP46P62068 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP46P62068 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
USP46P62068 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
USP46P62068 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
USP46P62068 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.6■□□□□ 0.41
USP46P62068 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 SPDYE11-202ENST00000450699 704 ntBASIC17.6■□□□□ 0.41
USP46P62068 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.6■□□□□ 0.41
USP46P62068 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
USP46P62068 AC079140.1-201ENST00000508039 487 ntBASIC17.6■□□□□ 0.41
USP46P62068 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms