Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 AC002056.1-201ENST00000395613 760 ntBASIC18.44■□□□□ 0.54
PEX3P56589 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.44■□□□□ 0.54
PEX3P56589 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.44■□□□□ 0.54
PEX3P56589 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.44■□□□□ 0.54
PEX3P56589 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.44■□□□□ 0.54
PEX3P56589 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.44■□□□□ 0.54
PEX3P56589 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.44■□□□□ 0.54
PEX3P56589 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.44■□□□□ 0.54
PEX3P56589 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.44■□□□□ 0.54
PEX3P56589 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.44■□□□□ 0.54
PEX3P56589 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.44■□□□□ 0.54
PEX3P56589 AC092902.6-201ENST00000641783 218 ntBASIC18.44■□□□□ 0.54
PEX3P56589 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PEX3P56589 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.44■□□□□ 0.54
PEX3P56589 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PEX3P56589 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.44■□□□□ 0.54
PEX3P56589 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
PEX3P56589 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX3P56589 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.43■□□□□ 0.54
PEX3P56589 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 AGGF1P2-201ENST00000426656 2106 ntBASIC18.43■□□□□ 0.54
PEX3P56589 AC020916.1-201ENST00000587762 1774 ntBASIC18.43■□□□□ 0.54
PEX3P56589 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PEX3P56589 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PEX3P56589 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.43■□□□□ 0.54
PEX3P56589 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.43■□□□□ 0.54
PEX3P56589 PMS2P4-201ENST00000412466 1052 ntBASIC18.43■□□□□ 0.54
PEX3P56589 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.43■□□□□ 0.54
PEX3P56589 MKNK2P1-201ENST00000437526 628 ntBASIC18.43■□□□□ 0.54
PEX3P56589 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.43■□□□□ 0.54
PEX3P56589 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.43■□□□□ 0.54
PEX3P56589 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 AL139011.1-202ENST00000642063 584 ntBASIC18.43■□□□□ 0.54
PEX3P56589 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PEX3P56589 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.43■□□□□ 0.54
PEX3P56589 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
PEX3P56589 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.43■□□□□ 0.54
PEX3P56589 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX3P56589 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PEX3P56589 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.42■□□□□ 0.54
PEX3P56589 NKILA-202ENST00000614771 2598 ntBASIC18.42■□□□□ 0.54
PEX3P56589 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PEX3P56589 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PEX3P56589 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.42■□□□□ 0.54
PEX3P56589 MIR1233-2-201ENST00000408138 82 ntBASIC18.42■□□□□ 0.54
PEX3P56589 MIR1233-1-201ENST00000408722 82 ntBASIC18.42■□□□□ 0.54
PEX3P56589 AC092474.2-201ENST00000424288 719 ntBASIC18.42■□□□□ 0.54
PEX3P56589 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.42■□□□□ 0.54
PEX3P56589 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.42■□□□□ 0.54
PEX3P56589 AC109635.5-201ENST00000533593 962 ntBASIC18.42■□□□□ 0.54
PEX3P56589 MIR3909-201ENST00000579518 119 ntBASIC18.42■□□□□ 0.54
PEX3P56589 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.42■□□□□ 0.54
PEX3P56589 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.42■□□□□ 0.54
PEX3P56589 AC099522.2-201ENST00000607001 744 ntBASIC18.42■□□□□ 0.54
PEX3P56589 AC055717.3-201ENST00000622967 595 ntBASIC18.42■□□□□ 0.54
PEX3P56589 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.42■□□□□ 0.54
PEX3P56589 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PEX3P56589 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
PEX3P56589 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PEX3P56589 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PEX3P56589 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.42■□□□□ 0.54
PEX3P56589 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PEX3P56589 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX3P56589 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PEX3P56589 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.41■□□□□ 0.54
PEX3P56589 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms