Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4AP35499 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4AP35499 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
SCN4AP35499 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SCN4AP35499 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCN4AP35499 MIR663B-201ENST00000408361 115 ntBASIC19.45■□□□□ 0.7
SCN4AP35499 YBX1P6-201ENST00000442962 1002 ntBASIC19.45■□□□□ 0.7
SCN4AP35499 AL139010.1-201ENST00000454878 894 ntBASIC19.45■□□□□ 0.7
SCN4AP35499 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN4AP35499 LINC01115-203ENST00000606068 577 ntBASIC19.45■□□□□ 0.7
SCN4AP35499 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4AP35499 AL021578.1-201ENST00000613646 709 ntBASIC19.45■□□□□ 0.7
SCN4AP35499 TUBB8P12-201ENST00000308911 1335 ntBASIC19.45■□□□□ 0.7
SCN4AP35499 TUBB7P-202ENST00000428444 1305 ntBASIC19.45■□□□□ 0.7
SCN4AP35499 TUBB8P7-204ENST00000567960 1332 ntBASIC19.45■□□□□ 0.7
SCN4AP35499 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN4AP35499 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN4AP35499 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4AP35499 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4AP35499 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.44■□□□□ 0.7
SCN4AP35499 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN4AP35499 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN4AP35499 RPL13AP20-201ENST00000459725 609 ntBASIC19.44■□□□□ 0.7
SCN4AP35499 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN4AP35499 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN4AP35499 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN4AP35499 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN4AP35499 GNRHR2-203ENST00000581100 1187 ntBASIC19.44■□□□□ 0.7
SCN4AP35499 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN4AP35499 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SCN4AP35499 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN4AP35499 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN4AP35499 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN4AP35499 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN4AP35499 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCN4AP35499 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN4AP35499 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCN4AP35499 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCN4AP35499 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCN4AP35499 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SCN4AP35499 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN4AP35499 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCN4AP35499 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN4AP35499 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 AL365330.1-201ENST00000607459 531 ntBASIC19.44■□□□□ 0.7
SCN4AP35499 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4AP35499 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SCN4AP35499 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SCN4AP35499 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN4AP35499 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN4AP35499 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 AL589702.1-201ENST00000641229 1509 ntBASIC19.43■□□□□ 0.7
SCN4AP35499 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SCN4AP35499 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SCN4AP35499 Z97205.2-201ENST00000564697 1639 ntBASIC19.43■□□□□ 0.7
SCN4AP35499 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
SCN4AP35499 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.43■□□□□ 0.7
SCN4AP35499 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN4AP35499 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN4AP35499 AC124283.3-201ENST00000570869 594 ntBASIC19.43■□□□□ 0.7
SCN4AP35499 RHOXF1P1-202ENST00000635473 501 ntBASIC19.43■□□□□ 0.7
SCN4AP35499 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 KRT8P39-201ENST00000396270 1433 ntBASIC19.43■□□□□ 0.7
SCN4AP35499 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SCN4AP35499 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.43■□□□□ 0.7
SCN4AP35499 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN4AP35499 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SCN4AP35499 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN4AP35499 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SCN4AP35499 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN4AP35499 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN4AP35499 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN4AP35499 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN4AP35499 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms