Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CDC27P30260 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.41■□□□□ 0.7
CDC27P30260 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.41■□□□□ 0.7
CDC27P30260 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CDC27P30260 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC27P30260 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.41■□□□□ 0.7
CDC27P30260 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC27P30260 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.41■□□□□ 0.7
CDC27P30260 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.41■□□□□ 0.7
CDC27P30260 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDC27P30260 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDC27P30260 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC27P30260 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC27P30260 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC27P30260 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC27P30260 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC27P30260 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC27P30260 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC27P30260 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC27P30260 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CDC27P30260 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC27P30260 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC27P30260 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC27P30260 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC27P30260 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC27P30260 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC27P30260 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC27P30260 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC27P30260 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC27P30260 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.4■□□□□ 0.7
CDC27P30260 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.4■□□□□ 0.7
CDC27P30260 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.4■□□□□ 0.7
CDC27P30260 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.4■□□□□ 0.7
CDC27P30260 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDC27P30260 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC27P30260 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC27P30260 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.4■□□□□ 0.7
CDC27P30260 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC27P30260 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDC27P30260 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC27P30260 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.4■□□□□ 0.7
CDC27P30260 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDC27P30260 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC27P30260 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC27P30260 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC27P30260 GPAA1P2-202ENST00000606848 1787 ntBASIC19.39■□□□□ 0.7
CDC27P30260 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC27P30260 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
CDC27P30260 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC27P30260 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC27P30260 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CDC27P30260 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC27P30260 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC27P30260 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC27P30260 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CDC27P30260 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC27P30260 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC27P30260 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC27P30260 AC140658.5-201ENST00000438532 169 ntBASIC19.39■□□□□ 0.69
CDC27P30260 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC27P30260 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC27P30260 AC074386.1-202ENST00000463561 864 ntBASIC19.39■□□□□ 0.69
CDC27P30260 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.39■□□□□ 0.69
CDC27P30260 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.39■□□□□ 0.69
CDC27P30260 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC27P30260 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.39■□□□□ 0.69
CDC27P30260 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.39■□□□□ 0.69
CDC27P30260 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC27P30260 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC27P30260 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDC27P30260 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC27P30260 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDC27P30260 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC27P30260 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC27P30260 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC27P30260 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC27P30260 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC27P30260 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC27P30260 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC27P30260 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC27P30260 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC27P30260 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CDC27P30260 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC27P30260 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC27P30260 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms