Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NFKB1P19838 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.05■□□□□ 0.32
NFKB1P19838 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NFKB1P19838 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.05■□□□□ 0.32
NFKB1P19838 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.05■□□□□ 0.32
NFKB1P19838 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NFKB1P19838 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.05■□□□□ 0.32
NFKB1P19838 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NFKB1P19838 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 AC087641.1-201ENST00000557561 1021 ntBASIC17.05■□□□□ 0.32
NFKB1P19838 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.05■□□□□ 0.32
NFKB1P19838 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NFKB1P19838 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.04■□□□□ 0.32
NFKB1P19838 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NFKB1P19838 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NFKB1P19838 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NFKB1P19838 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.04■□□□□ 0.32
NFKB1P19838 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NFKB1P19838 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.04■□□□□ 0.32
NFKB1P19838 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.04■□□□□ 0.32
NFKB1P19838 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 PRSS29P-201ENST00000440800 595 ntBASIC17.04■□□□□ 0.32
NFKB1P19838 FAM185BP-201ENST00000443595 716 ntBASIC17.04■□□□□ 0.32
NFKB1P19838 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NFKB1P19838 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.04■□□□□ 0.32
NFKB1P19838 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.04■□□□□ 0.32
NFKB1P19838 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
NFKB1P19838 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.04■□□□□ 0.32
NFKB1P19838 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.04■□□□□ 0.32
NFKB1P19838 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.04■□□□□ 0.32
NFKB1P19838 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.04■□□□□ 0.32
NFKB1P19838 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.04■□□□□ 0.32
NFKB1P19838 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.04■□□□□ 0.32
NFKB1P19838 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.04■□□□□ 0.32
NFKB1P19838 AC005052.1-201ENST00000625181 2492 ntBASIC17.04■□□□□ 0.32
NFKB1P19838 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.04■□□□□ 0.32
NFKB1P19838 KRT8P39-201ENST00000396270 1433 ntBASIC17.04■□□□□ 0.32
NFKB1P19838 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NFKB1P19838 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
NFKB1P19838 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFKB1P19838 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.03■□□□□ 0.32
NFKB1P19838 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
NFKB1P19838 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NFKB1P19838 PCDH8P1-201ENST00000428983 2773 ntBASIC17.03■□□□□ 0.32
NFKB1P19838 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
NFKB1P19838 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NFKB1P19838 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.03■□□□□ 0.32
NFKB1P19838 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 IGLL3P-201ENST00000412472 434 ntBASIC17.03■□□□□ 0.32
NFKB1P19838 HCG4-201ENST00000418983 998 ntBASIC17.03■□□□□ 0.32
NFKB1P19838 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.03■□□□□ 0.32
NFKB1P19838 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.03■□□□□ 0.32
NFKB1P19838 CXCL1P1-201ENST00000502804 216 ntBASIC17.03■□□□□ 0.32
NFKB1P19838 AC079776.4-201ENST00000511039 504 ntBASIC17.03■□□□□ 0.32
NFKB1P19838 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.03■□□□□ 0.32
NFKB1P19838 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms