Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
GGPS1O95749 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
GGPS1O95749 BCRP1-201ENST00000444246 691 ntBASIC18.77■□□□□ 0.6
GGPS1O95749 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
GGPS1O95749 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GGPS1O95749 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
GGPS1O95749 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.77■□□□□ 0.6
GGPS1O95749 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.77■□□□□ 0.6
GGPS1O95749 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GGPS1O95749 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
GGPS1O95749 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
GGPS1O95749 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.76■□□□□ 0.59
GGPS1O95749 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.76■□□□□ 0.59
GGPS1O95749 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GGPS1O95749 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.76■□□□□ 0.59
GGPS1O95749 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GGPS1O95749 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.76■□□□□ 0.59
GGPS1O95749 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GGPS1O95749 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GGPS1O95749 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.76■□□□□ 0.59
GGPS1O95749 MIR346-201ENST00000362234 95 ntBASIC18.76■□□□□ 0.59
GGPS1O95749 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.76■□□□□ 0.59
GGPS1O95749 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GGPS1O95749 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.76■□□□□ 0.59
GGPS1O95749 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.76■□□□□ 0.59
GGPS1O95749 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.76■□□□□ 0.59
GGPS1O95749 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.76■□□□□ 0.59
GGPS1O95749 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GGPS1O95749 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.76■□□□□ 0.59
GGPS1O95749 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GGPS1O95749 AL096865.1-201ENST00000606796 927 ntBASIC18.76■□□□□ 0.59
GGPS1O95749 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.76■□□□□ 0.59
GGPS1O95749 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GGPS1O95749 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.76■□□□□ 0.59
GGPS1O95749 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GGPS1O95749 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GGPS1O95749 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GGPS1O95749 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.76■□□□□ 0.59
GGPS1O95749 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GGPS1O95749 AC008677.1-201ENST00000519230 1561 ntBASIC18.76■□□□□ 0.59
GGPS1O95749 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GGPS1O95749 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
GGPS1O95749 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.76■□□□□ 0.59
GGPS1O95749 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.76■□□□□ 0.59
GGPS1O95749 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GGPS1O95749 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
GGPS1O95749 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GGPS1O95749 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GGPS1O95749 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GGPS1O95749 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.75■□□□□ 0.59
GGPS1O95749 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GGPS1O95749 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
GGPS1O95749 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GGPS1O95749 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.75■□□□□ 0.59
GGPS1O95749 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GGPS1O95749 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GGPS1O95749 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.75■□□□□ 0.59
GGPS1O95749 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.75■□□□□ 0.59
GGPS1O95749 KLF2P3-201ENST00000451977 1087 ntBASIC18.75■□□□□ 0.59
GGPS1O95749 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GGPS1O95749 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.75■□□□□ 0.59
GGPS1O95749 ALG1L8P-201ENST00000533887 760 ntBASIC18.75■□□□□ 0.59
GGPS1O95749 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.75■□□□□ 0.59
GGPS1O95749 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GGPS1O95749 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GGPS1O95749 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GGPS1O95749 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.75■□□□□ 0.59
GGPS1O95749 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
GGPS1O95749 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
GGPS1O95749 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
GGPS1O95749 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
GGPS1O95749 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.75■□□□□ 0.59
GGPS1O95749 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
GGPS1O95749 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GGPS1O95749 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
GGPS1O95749 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
GGPS1O95749 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.74■□□□□ 0.59
GGPS1O95749 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.74■□□□□ 0.59
GGPS1O95749 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.74■□□□□ 0.59
GGPS1O95749 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.74■□□□□ 0.59
GGPS1O95749 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 AC080080.1-201ENST00000625121 2420 ntBASIC18.74■□□□□ 0.59
GGPS1O95749 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms