Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.63□□□□□ -0.07
UPK1BO75841 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.63□□□□□ -0.07
UPK1BO75841 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.63□□□□□ -0.07
UPK1BO75841 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.63□□□□□ -0.07
UPK1BO75841 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UPK1BO75841 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.63□□□□□ -0.07
UPK1BO75841 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
UPK1BO75841 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UPK1BO75841 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.63□□□□□ -0.07
UPK1BO75841 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.63□□□□□ -0.07
UPK1BO75841 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
UPK1BO75841 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.63□□□□□ -0.07
UPK1BO75841 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UPK1BO75841 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
UPK1BO75841 AC069224.1-201ENST00000566372 1715 ntBASIC14.63□□□□□ -0.07
UPK1BO75841 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
UPK1BO75841 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.63□□□□□ -0.07
UPK1BO75841 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1BO75841 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1BO75841 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1BO75841 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.62□□□□□ -0.07
UPK1BO75841 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
UPK1BO75841 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
UPK1BO75841 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1BO75841 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
UPK1BO75841 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
UPK1BO75841 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1BO75841 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.62□□□□□ -0.07
UPK1BO75841 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1BO75841 AC112698.1-201ENST00000510299 916 ntBASIC14.62□□□□□ -0.07
UPK1BO75841 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
UPK1BO75841 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.62□□□□□ -0.07
UPK1BO75841 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.62□□□□□ -0.07
UPK1BO75841 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
UPK1BO75841 AL390755.1-201ENST00000623716 2027 ntBASIC14.62□□□□□ -0.07
UPK1BO75841 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1BO75841 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.62□□□□□ -0.07
UPK1BO75841 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.62□□□□□ -0.07
UPK1BO75841 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1BO75841 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1BO75841 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.62□□□□□ -0.07
UPK1BO75841 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1BO75841 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
UPK1BO75841 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
UPK1BO75841 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
UPK1BO75841 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms