Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 Z92544.3-201ENST00000624747 417 ntBASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 MIR4515-201ENST00000584082 81 ntBASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 AC138761.1-201ENST00000584393 385 ntBASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 AL139327.4-201ENST00000612362 153 ntBASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGA9Q9Y5G4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGA9Q9Y5G4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGA9Q9Y5G4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGA9Q9Y5G4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGA9Q9Y5G4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 TFAMP1-201ENST00000412727 736 ntBASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 AC079140.1-201ENST00000508039 487 ntBASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 AC107918.2-201ENST00000530817 355 ntBASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 AC190387.1-201ENST00000551683 408 ntBASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 RARRES2P8-201ENST00000566335 367 ntBASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 AP001059.3-201ENST00000619053 235 ntBASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 AL161645.1-201ENST00000622716 1255 ntBASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA9Q9Y5G4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms