Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 SPDYE17-201ENST00000412399 783 ntBASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 MIR4259-201ENST00000584466 101 ntBASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 CTBP2P3-201ENST00000585629 1255 ntBASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 AC004461.2-201ENST00000629517 803 ntBASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNRF3Q9ULT6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 ELK1P1-201ENST00000485699 580 ntBASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 AC092658.1-201ENST00000505836 891 ntBASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 AC023310.3-201ENST00000557027 670 ntBASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 AC100756.1-201ENST00000562736 682 ntBASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 AC138749.3-201ENST00000567691 622 ntBASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 AC024267.1-201ENST00000582320 895 ntBASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 AC116165.1-201ENST00000611806 668 ntBASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 KRT8P39-201ENST00000396270 1433 ntBASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 AL138688.1-201ENST00000624851 1594 ntBASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNRF3Q9ULT6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 AC123567.1-201ENST00000548294 1261 ntBASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ZNRF3Q9ULT6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
ZNRF3Q9ULT6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
ZNRF3Q9ULT6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
ZNRF3Q9ULT6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ZNRF3Q9ULT6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ZNRF3Q9ULT6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms