Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.71■□□□□ 0.27
TREX1Q9NSU2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.71■□□□□ 0.27
TREX1Q9NSU2 AC009947.1-201ENST00000444350 727 ntBASIC16.71■□□□□ 0.27
TREX1Q9NSU2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 IGHV3-22-201ENST00000520721 359 ntBASIC16.71■□□□□ 0.27
TREX1Q9NSU2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 UNC93B6-202ENST00000528242 690 ntBASIC16.71■□□□□ 0.27
TREX1Q9NSU2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 AP001005.1-201ENST00000571755 1248 ntBASIC16.71■□□□□ 0.27
TREX1Q9NSU2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.71■□□□□ 0.27
TREX1Q9NSU2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TREX1Q9NSU2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.71■□□□□ 0.26
TREX1Q9NSU2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.71■□□□□ 0.26
TREX1Q9NSU2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TREX1Q9NSU2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TREX1Q9NSU2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 AC012569.1-201ENST00000591191 1524 ntBASIC16.7■□□□□ 0.26
TREX1Q9NSU2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.7■□□□□ 0.26
TREX1Q9NSU2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 AC009078.2-202ENST00000463353 338 ntBASIC16.7■□□□□ 0.26
TREX1Q9NSU2 CXCL1P1-201ENST00000502804 216 ntBASIC16.7■□□□□ 0.26
TREX1Q9NSU2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 AL662844.1-201ENST00000546340 181 ntBASIC16.7■□□□□ 0.26
TREX1Q9NSU2 MIR4515-201ENST00000584082 81 ntBASIC16.7■□□□□ 0.26
TREX1Q9NSU2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 HLA-A-201ENST00000376802 1334 ntBASIC16.7■□□□□ 0.26
TREX1Q9NSU2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TREX1Q9NSU2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 IGLL3P-201ENST00000412472 434 ntBASIC16.69■□□□□ 0.26
TREX1Q9NSU2 VN2R19P-201ENST00000442399 1052 ntBASIC16.69■□□□□ 0.26
TREX1Q9NSU2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.69■□□□□ 0.26
TREX1Q9NSU2 MIR4751-201ENST00000578027 74 ntBASIC16.69■□□□□ 0.26
TREX1Q9NSU2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms