Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 AP005242.2-201ENST00000580065 1175 ntBASIC19.93■□□□□ 0.78
RTN4Q9NQC3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 AL024508.2-201ENST00000607749 1894 ntBASIC19.92■□□□□ 0.78
RTN4Q9NQC3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 WWOX-216ENST00000569818 525 ntBASIC19.92■□□□□ 0.78
RTN4Q9NQC3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 CR769767.2-201ENST00000622735 460 ntBASIC19.92■□□□□ 0.78
RTN4Q9NQC3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RTN4Q9NQC3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 PRORSD1P-201ENST00000295112 541 ntBASIC19.91■□□□□ 0.78
RTN4Q9NQC3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 FAM201B-201ENST00000458407 597 ntBASIC19.91■□□□□ 0.78
RTN4Q9NQC3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 AP003041.3-201ENST00000527151 707 ntBASIC19.91■□□□□ 0.78
RTN4Q9NQC3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.91■□□□□ 0.78
RTN4Q9NQC3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4Q9NQC3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 AL391807.1-203ENST00000604392 2365 ntBASIC19.9■□□□□ 0.78
RTN4Q9NQC3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4Q9NQC3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms