Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.94■□□□□ 0.3
VPS11Q9H270 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS11Q9H270 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
VPS11Q9H270 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS11Q9H270 KRT17P6-201ENST00000453795 1220 ntBASIC16.94■□□□□ 0.3
VPS11Q9H270 HLA-J-202ENST00000469281 1241 ntBASIC16.94■□□□□ 0.3
VPS11Q9H270 FAM86EP-206ENST00000510506 987 ntBASIC16.94■□□□□ 0.3
VPS11Q9H270 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.94■□□□□ 0.3
VPS11Q9H270 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.94■□□□□ 0.3
VPS11Q9H270 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.94■□□□□ 0.3
VPS11Q9H270 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.94■□□□□ 0.3
VPS11Q9H270 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS11Q9H270 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
VPS11Q9H270 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.94■□□□□ 0.3
VPS11Q9H270 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.94■□□□□ 0.3
VPS11Q9H270 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS11Q9H270 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VPS11Q9H270 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
VPS11Q9H270 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS11Q9H270 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VPS11Q9H270 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS11Q9H270 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
VPS11Q9H270 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.93■□□□□ 0.3
VPS11Q9H270 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
VPS11Q9H270 LINC00265-3P-201ENST00000447588 903 ntBASIC16.93■□□□□ 0.3
VPS11Q9H270 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.93■□□□□ 0.3
VPS11Q9H270 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.93■□□□□ 0.3
VPS11Q9H270 TPSP2-201ENST00000561760 610 ntBASIC16.93■□□□□ 0.3
VPS11Q9H270 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS11Q9H270 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.93■□□□□ 0.3
VPS11Q9H270 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VPS11Q9H270 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VPS11Q9H270 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS11Q9H270 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 AC097637.2-201ENST00000624096 1997 ntBASIC16.93■□□□□ 0.3
VPS11Q9H270 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS11Q9H270 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
VPS11Q9H270 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS11Q9H270 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS11Q9H270 AL513477.1-201ENST00000602865 2407 ntBASIC16.92■□□□□ 0.3
VPS11Q9H270 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.92■□□□□ 0.3
VPS11Q9H270 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VPS11Q9H270 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
VPS11Q9H270 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS11Q9H270 ACTG1P4-201ENST00000425123 1122 ntBASIC16.92■□□□□ 0.3
VPS11Q9H270 DRAXINP1-201ENST00000437611 948 ntBASIC16.92■□□□□ 0.3
VPS11Q9H270 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS11Q9H270 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.92■□□□□ 0.3
VPS11Q9H270 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.92■□□□□ 0.3
VPS11Q9H270 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS11Q9H270 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.92■□□□□ 0.3
VPS11Q9H270 AP002414.4-201ENST00000589764 1148 ntBASIC16.92■□□□□ 0.3
VPS11Q9H270 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VPS11Q9H270 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS11Q9H270 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms