Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 AL662844.4-201ENST00000606367 2838 ntBASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 AP002414.1-201ENST00000391405 1147 ntBASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 SIGLEC30P-201ENST00000455569 941 ntBASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 MTDHP3-201ENST00000594186 672 ntBASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 AL049840.3-201ENST00000602669 611 ntBASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 AC243591.1-201ENST00000452967 1364 ntBASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FOXP3Q9BZS1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 AC093909.1-201ENST00000504731 1122 ntBASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 RNPS1P1-201ENST00000507437 918 ntBASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 AC013467.2-201ENST00000605472 835 ntBASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 AL355877.3-201ENST00000622820 899 ntBASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 ALOX12P2-203ENST00000570921 1945 ntBASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 AL365203.3-201ENST00000609742 2057 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms