Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 UPF3AP3-201ENST00000420996 769 ntBASIC15.82■□□□□ 0.12
TREX2Q9BQ50 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 PRYP5-201ENST00000451909 266 ntBASIC15.82■□□□□ 0.12
TREX2Q9BQ50 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 AL691403.2-201ENST00000618460 490 ntBASIC15.82■□□□□ 0.12
TREX2Q9BQ50 AC055717.3-201ENST00000622967 595 ntBASIC15.82■□□□□ 0.12
TREX2Q9BQ50 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 AL021920.2-201ENST00000624828 1351 ntBASIC15.82■□□□□ 0.12
TREX2Q9BQ50 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 AL391256.1-201ENST00000443260 1855 ntBASIC15.82■□□□□ 0.12
TREX2Q9BQ50 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TREX2Q9BQ50 AL391005.1-201ENST00000623953 2435 ntBASIC15.82■□□□□ 0.12
TREX2Q9BQ50 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 MIR940-201ENST00000401276 94 ntBASIC15.81■□□□□ 0.12
TREX2Q9BQ50 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX2Q9BQ50 DOC2GP-204ENST00000639052 2548 ntBASIC15.81■□□□□ 0.12
TREX2Q9BQ50 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 HMGN1P19-201ENST00000436976 333 ntBASIC15.8■□□□□ 0.12
TREX2Q9BQ50 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.8■□□□□ 0.12
TREX2Q9BQ50 AC034105.1-201ENST00000563488 319 ntBASIC15.8■□□□□ 0.12
TREX2Q9BQ50 AC021087.4-201ENST00000563761 564 ntBASIC15.8■□□□□ 0.12
TREX2Q9BQ50 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms