Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
ABCA3Q99758 GGT4P-201ENST00000623672 1708 ntBASIC21.9■■□□□ 1.1
ABCA3Q99758 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
ABCA3Q99758 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ABCA3Q99758 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
ABCA3Q99758 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
ABCA3Q99758 TPI1-206ENST00000488464 791 ntTSL 5 BASIC21.89■■□□□ 1.1
ABCA3Q99758 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.89■■□□□ 1.1
ABCA3Q99758 EMC4-209ENST00000559421 497 ntTSL 2 BASIC21.89■■□□□ 1.1
ABCA3Q99758 AC036164.1-201ENST00000570544 333 ntBASIC21.89■■□□□ 1.1
ABCA3Q99758 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ABCA3Q99758 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
ABCA3Q99758 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.89■■□□□ 1.1
ABCA3Q99758 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ABCA3Q99758 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ABCA3Q99758 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.89■■□□□ 1.09
ABCA3Q99758 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC21.89■■□□□ 1.09
ABCA3Q99758 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ABCA3Q99758 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
ABCA3Q99758 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.89■■□□□ 1.09
ABCA3Q99758 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC21.89■■□□□ 1.09
ABCA3Q99758 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
ABCA3Q99758 FAM21FP-201ENST00000426241 1131 ntBASIC21.89■■□□□ 1.09
ABCA3Q99758 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC21.89■■□□□ 1.09
ABCA3Q99758 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC21.89■■□□□ 1.09
ABCA3Q99758 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC21.89■■□□□ 1.09
ABCA3Q99758 AC104581.1-202ENST00000635932 2618 ntBASIC21.89■■□□□ 1.09
ABCA3Q99758 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ABCA3Q99758 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCA3Q99758 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ABCA3Q99758 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCA3Q99758 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.88■■□□□ 1.09
ABCA3Q99758 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ABCA3Q99758 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
ABCA3Q99758 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.88■■□□□ 1.09
ABCA3Q99758 C2orf69P2-201ENST00000562032 1123 ntBASIC21.88■■□□□ 1.09
ABCA3Q99758 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC21.88■■□□□ 1.09
ABCA3Q99758 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC21.88■■□□□ 1.09
ABCA3Q99758 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCA3Q99758 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC21.87■■□□□ 1.09
ABCA3Q99758 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCA3Q99758 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCA3Q99758 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC21.87■■□□□ 1.09
ABCA3Q99758 AC005229.1-201ENST00000392885 409 ntBASIC21.87■■□□□ 1.09
ABCA3Q99758 KLF2P4-201ENST00000451959 1225 ntBASIC21.87■■□□□ 1.09
ABCA3Q99758 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCA3Q99758 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC21.87■■□□□ 1.09
ABCA3Q99758 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC21.87■■□□□ 1.09
ABCA3Q99758 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC21.87■■□□□ 1.09
ABCA3Q99758 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCA3Q99758 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21.87■■□□□ 1.09
ABCA3Q99758 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.87■■□□□ 1.09
ABCA3Q99758 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCA3Q99758 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCA3Q99758 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
ABCA3Q99758 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.87■■□□□ 1.09
ABCA3Q99758 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ABCA3Q99758 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCA3Q99758 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
ABCA3Q99758 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCA3Q99758 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ABCA3Q99758 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCA3Q99758 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC21.86■■□□□ 1.09
ABCA3Q99758 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ABCA3Q99758 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC21.86■■□□□ 1.09
ABCA3Q99758 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.86■■□□□ 1.09
ABCA3Q99758 FTH1P14-201ENST00000482930 551 ntBASIC21.86■■□□□ 1.09
ABCA3Q99758 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCA3Q99758 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.86■■□□□ 1.09
ABCA3Q99758 APRT-204ENST00000563655 709 ntTSL 5 BASIC21.86■■□□□ 1.09
ABCA3Q99758 Z97205.2-201ENST00000564697 1639 ntBASIC21.86■■□□□ 1.09
ABCA3Q99758 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.86■■□□□ 1.09
ABCA3Q99758 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.86■■□□□ 1.09
ABCA3Q99758 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC21.86■■□□□ 1.09
ABCA3Q99758 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
ABCA3Q99758 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.86■■□□□ 1.09
ABCA3Q99758 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.86■■□□□ 1.09
ABCA3Q99758 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.86■■□□□ 1.09
ABCA3Q99758 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ABCA3Q99758 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
ABCA3Q99758 AL136982.4-201ENST00000437689 1740 ntBASIC21.86■■□□□ 1.09
ABCA3Q99758 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC21.86■■□□□ 1.09
ABCA3Q99758 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
ABCA3Q99758 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.86■■□□□ 1.09
ABCA3Q99758 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
ABCA3Q99758 BRWD1P1-201ENST00000401091 371 ntBASIC21.86■■□□□ 1.09
ABCA3Q99758 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC21.86■■□□□ 1.09
ABCA3Q99758 RPL28-203ENST00000428193 573 ntTSL 2 BASIC21.86■■□□□ 1.09
ABCA3Q99758 GOLGA2P4-201ENST00000441462 777 ntBASIC21.86■■□□□ 1.09
ABCA3Q99758 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC21.86■■□□□ 1.09
ABCA3Q99758 RPL28-207ENST00000558815 616 ntTSL 2 BASIC21.86■■□□□ 1.09
ABCA3Q99758 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC21.86■■□□□ 1.09
ABCA3Q99758 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ABCA3Q99758 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.85■■□□□ 1.09
ABCA3Q99758 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms