Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NECTIN4Q96NY8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NECTIN4Q96NY8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.27■□□□□ 0.35
NECTIN4Q96NY8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.27■□□□□ 0.35
NECTIN4Q96NY8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 AL080243.2-201ENST00000418783 582 ntBASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 RN7SL618P-201ENST00000477850 296 ntBASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 AC016396.2-201ENST00000562575 1417 ntBASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NECTIN4Q96NY8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 MIR1909-201ENST00000411312 80 ntBASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 DOC2GP-202ENST00000514950 1163 ntBASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 RAB43P1-201ENST00000561790 589 ntBASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN4Q96NY8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 GNAQP1-201ENST00000444815 1067 ntBASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 RNA5SP410-201ENST00000516285 106 ntBASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms