Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 MTDHP5-201ENST00000598980 586 ntBASIC15.09■□□□□ 0.01
CPNE4Q96A23 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CPNE4Q96A23 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
CPNE4Q96A23 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.08■□□□□ 0.01
CPNE4Q96A23 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CPNE4Q96A23 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CPNE4Q96A23 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CPNE4Q96A23 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.08■□□□□ 0.01
CPNE4Q96A23 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CPNE4Q96A23 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.08■□□□□ 0
CPNE4Q96A23 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.08■□□□□ 0
CPNE4Q96A23 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.08■□□□□ 0
CPNE4Q96A23 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CPNE4Q96A23 AC074386.1-202ENST00000463561 864 ntBASIC15.08■□□□□ 0
CPNE4Q96A23 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CPNE4Q96A23 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.08■□□□□ 0
CPNE4Q96A23 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.08■□□□□ 0
CPNE4Q96A23 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.08■□□□□ 0
CPNE4Q96A23 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.08■□□□□ 0
CPNE4Q96A23 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.08■□□□□ 0
CPNE4Q96A23 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.08■□□□□ 0
CPNE4Q96A23 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.08■□□□□ 0
CPNE4Q96A23 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.08■□□□□ 0
CPNE4Q96A23 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.08■□□□□ 0
CPNE4Q96A23 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CPNE4Q96A23 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.08■□□□□ 0
CPNE4Q96A23 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.08■□□□□ 0
CPNE4Q96A23 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE4Q96A23 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.07■□□□□ 0
CPNE4Q96A23 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CPNE4Q96A23 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.07■□□□□ 0
CPNE4Q96A23 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.07■□□□□ 0
CPNE4Q96A23 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.07■□□□□ 0
CPNE4Q96A23 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.07■□□□□ 0
CPNE4Q96A23 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CPNE4Q96A23 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.07■□□□□ 0
CPNE4Q96A23 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.07■□□□□ 0
CPNE4Q96A23 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.07■□□□□ 0
CPNE4Q96A23 MCCD1P2-201ENST00000423228 335 ntBASIC15.07■□□□□ 0
CPNE4Q96A23 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.07■□□□□ 0
CPNE4Q96A23 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.07■□□□□ 0
CPNE4Q96A23 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.07■□□□□ 0
CPNE4Q96A23 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.07■□□□□ 0
CPNE4Q96A23 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.07■□□□□ 0
CPNE4Q96A23 AC013467.2-201ENST00000605472 835 ntBASIC15.07■□□□□ 0
CPNE4Q96A23 AL513190.1-201ENST00000621254 727 ntBASIC15.07■□□□□ 0
CPNE4Q96A23 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CPNE4Q96A23 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.07■□□□□ 0
CPNE4Q96A23 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.07■□□□□ 0
CPNE4Q96A23 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE4Q96A23 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms