Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 AL031432.2-201ENST00000566714 459 ntBASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 AL928711.1-201ENST00000570165 459 ntBASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 AL355385.1-201ENST00000606123 409 ntBASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 AP001350.2-201ENST00000625104 1094 ntBASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 AL645728.2-201ENST00000641974 660 ntBASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCUBE3Q8IX30 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCUBE3Q8IX30 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 OR6D1P-203ENST00000641209 4860 ntBASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCUBE3Q8IX30 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCUBE3Q8IX30 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 PDPK2P-202ENST00000562415 1191 ntBASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 AC040169.1-201ENST00000565382 521 ntBASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms