Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 AL354751.1-201ENST00000412768 1863 ntBASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 DGCR5-201ENST00000399539 862 ntBASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 AC011495.1-201ENST00000498085 584 ntBASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LYSMD4Q5XG99 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LYSMD4Q5XG99 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LYSMD4Q5XG99 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LYSMD4Q5XG99 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LYSMD4Q5XG99 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.33■□□□□ 0.21
LYSMD4Q5XG99 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
LYSMD4Q5XG99 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LYSMD4Q5XG99 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
LYSMD4Q5XG99 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 AL512384.1-201ENST00000406683 331 ntBASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 AC093004.1-201ENST00000508850 424 ntBASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 ZNF890P-202ENST00000530367 1156 ntBASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 AC010336.2-201ENST00000564226 506 ntBASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 AC017083.2-201ENST00000608069 979 ntBASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 AL133215.2-201ENST00000609242 977 ntBASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 IGHV3-72-202ENST00000621503 303 ntBASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 TUBB8P12-201ENST00000308911 1335 ntBASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 TUBB7P-202ENST00000428444 1305 ntBASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 TUBB8P7-204ENST00000567960 1332 ntBASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD4Q5XG99 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 SPDYE19P-201ENST00000338590 713 ntBASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 DOC2GP-202ENST00000514950 1163 ntBASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.32■□□□□ 0.2
LYSMD4Q5XG99 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms