Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 MRPL3P1-201ENST00000400109 1033 ntBASIC15.91■□□□□ 0.14
RAE1P78406 AL031284.1-201ENST00000419297 478 ntBASIC15.91■□□□□ 0.14
RAE1P78406 FAAHP1-202ENST00000446499 1238 ntBASIC15.91■□□□□ 0.14
RAE1P78406 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 AC092910.1-201ENST00000482027 1129 ntBASIC15.91■□□□□ 0.14
RAE1P78406 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.91■□□□□ 0.14
RAE1P78406 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.91■□□□□ 0.14
RAE1P78406 AL160237.2-201ENST00000556165 472 ntBASIC15.91■□□□□ 0.14
RAE1P78406 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 ACTL9-202ENST00000612068 1252 ntBASIC15.91■□□□□ 0.14
RAE1P78406 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.91■□□□□ 0.14
RAE1P78406 AL773604.1-201ENST00000617417 272 ntBASIC15.91■□□□□ 0.14
RAE1P78406 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RAE1P78406 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
RAE1P78406 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAE1P78406 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
RAE1P78406 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.9■□□□□ 0.14
RAE1P78406 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 HCG4-201ENST00000418983 998 ntBASIC15.9■□□□□ 0.14
RAE1P78406 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 KRT126P-201ENST00000549467 1181 ntBASIC15.9■□□□□ 0.14
RAE1P78406 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.9■□□□□ 0.14
RAE1P78406 MTHFR-217ENST00000641820 1569 ntBASIC15.9■□□□□ 0.14
RAE1P78406 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.9■□□□□ 0.14
RAE1P78406 GPAA1P2-202ENST00000606848 1787 ntBASIC15.9■□□□□ 0.14
RAE1P78406 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RAE1P78406 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAE1P78406 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.89■□□□□ 0.13
RAE1P78406 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.89■□□□□ 0.13
RAE1P78406 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAE1P78406 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.89■□□□□ 0.13
RAE1P78406 AL513523.2-202ENST00000427283 2040 ntBASIC15.89■□□□□ 0.13
RAE1P78406 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.89■□□□□ 0.13
RAE1P78406 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.89■□□□□ 0.13
RAE1P78406 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.89■□□□□ 0.13
RAE1P78406 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.89■□□□□ 0.13
RAE1P78406 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.89■□□□□ 0.13
RAE1P78406 FAM185BP-201ENST00000443595 716 ntBASIC15.89■□□□□ 0.13
RAE1P78406 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAE1P78406 AC116407.3-201ENST00000623905 1129 ntBASIC15.89■□□□□ 0.13
RAE1P78406 LINC02199-201ENST00000506655 2702 ntBASIC15.89■□□□□ 0.13
RAE1P78406 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms