Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A5P29400 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
COL4A5P29400 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A5P29400 TUBB8P12-201ENST00000308911 1335 ntBASIC19.81■□□□□ 0.76
COL4A5P29400 TUBB7P-202ENST00000428444 1305 ntBASIC19.81■□□□□ 0.76
COL4A5P29400 TUBB8P7-204ENST00000567960 1332 ntBASIC19.81■□□□□ 0.76
COL4A5P29400 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A5P29400 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COL4A5P29400 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
COL4A5P29400 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A5P29400 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.81■□□□□ 0.76
COL4A5P29400 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.81■□□□□ 0.76
COL4A5P29400 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.81■□□□□ 0.76
COL4A5P29400 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.81■□□□□ 0.76
COL4A5P29400 TMEM261P1-201ENST00000604899 340 ntBASIC19.81■□□□□ 0.76
COL4A5P29400 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COL4A5P29400 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A5P29400 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
COL4A5P29400 AL133338.1-201ENST00000565695 1517 ntBASIC19.81■□□□□ 0.76
COL4A5P29400 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.81■□□□□ 0.76
COL4A5P29400 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COL4A5P29400 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.8■□□□□ 0.76
COL4A5P29400 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A5P29400 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A5P29400 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A5P29400 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.8■□□□□ 0.76
COL4A5P29400 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.8■□□□□ 0.76
COL4A5P29400 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A5P29400 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
COL4A5P29400 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A5P29400 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COL4A5P29400 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A5P29400 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.8■□□□□ 0.76
COL4A5P29400 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COL4A5P29400 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COL4A5P29400 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.8■□□□□ 0.76
COL4A5P29400 HIST3H2BA-201ENST00000436555 524 ntBASIC19.8■□□□□ 0.76
COL4A5P29400 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.8■□□□□ 0.76
COL4A5P29400 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COL4A5P29400 AC104989.1-201ENST00000519711 778 ntBASIC19.8■□□□□ 0.76
COL4A5P29400 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A5P29400 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.8■□□□□ 0.76
COL4A5P29400 RRP7BP-205ENST00000566851 833 ntBASIC19.8■□□□□ 0.76
COL4A5P29400 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.8■□□□□ 0.76
COL4A5P29400 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.8■□□□□ 0.76
COL4A5P29400 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COL4A5P29400 AC018665.1-201ENST00000622927 1362 ntBASIC19.8■□□□□ 0.76
COL4A5P29400 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COL4A5P29400 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A5P29400 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.79■□□□□ 0.76
COL4A5P29400 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COL4A5P29400 CLK3P2-201ENST00000427566 1453 ntBASIC19.79■□□□□ 0.76
COL4A5P29400 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.79■□□□□ 0.76
COL4A5P29400 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COL4A5P29400 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
COL4A5P29400 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.79■□□□□ 0.76
COL4A5P29400 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
COL4A5P29400 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.79■□□□□ 0.76
COL4A5P29400 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.79■□□□□ 0.76
COL4A5P29400 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
COL4A5P29400 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.79■□□□□ 0.76
COL4A5P29400 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
COL4A5P29400 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL4A5P29400 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.79■□□□□ 0.76
COL4A5P29400 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A5P29400 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.79■□□□□ 0.76
COL4A5P29400 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
COL4A5P29400 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.78■□□□□ 0.76
COL4A5P29400 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.78■□□□□ 0.76
COL4A5P29400 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A5P29400 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A5P29400 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.78■□□□□ 0.76
COL4A5P29400 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.78■□□□□ 0.76
COL4A5P29400 MIR6787-201ENST00000616675 61 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms