Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.21■□□□□ 0.83
CHMLP26374 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.21■□□□□ 0.83
CHMLP26374 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.21■□□□□ 0.83
CHMLP26374 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.21■□□□□ 0.83
CHMLP26374 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMLP26374 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.21■□□□□ 0.83
CHMLP26374 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CHMLP26374 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMLP26374 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.21■□□□□ 0.83
CHMLP26374 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CHMLP26374 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CHMLP26374 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CHMLP26374 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.2■□□□□ 0.83
CHMLP26374 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHMLP26374 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMLP26374 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMLP26374 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHMLP26374 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMLP26374 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMLP26374 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMLP26374 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMLP26374 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CHMLP26374 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.2■□□□□ 0.82
CHMLP26374 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.2■□□□□ 0.82
CHMLP26374 AP001350.2-201ENST00000625104 1094 ntBASIC20.2■□□□□ 0.82
CHMLP26374 AC012569.1-201ENST00000591191 1524 ntBASIC20.2■□□□□ 0.82
CHMLP26374 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMLP26374 GPAA1P2-202ENST00000606848 1787 ntBASIC20.2■□□□□ 0.82
CHMLP26374 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMLP26374 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMLP26374 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMLP26374 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHMLP26374 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHMLP26374 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHMLP26374 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMLP26374 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHMLP26374 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMLP26374 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMLP26374 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CHMLP26374 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.19■□□□□ 0.82
CHMLP26374 HCG4B-203ENST00000450128 991 ntBASIC20.19■□□□□ 0.82
CHMLP26374 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CHMLP26374 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CHMLP26374 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMLP26374 MIR4515-201ENST00000584082 81 ntBASIC20.19■□□□□ 0.82
CHMLP26374 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.19■□□□□ 0.82
CHMLP26374 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMLP26374 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.19■□□□□ 0.82
CHMLP26374 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMLP26374 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHMLP26374 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMLP26374 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CHMLP26374 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMLP26374 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMLP26374 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMLP26374 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CHMLP26374 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.18■□□□□ 0.82
CHMLP26374 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMLP26374 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.18■□□□□ 0.82
CHMLP26374 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMLP26374 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMLP26374 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMLP26374 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMLP26374 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.18■□□□□ 0.82
CHMLP26374 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms