Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.65■□□□□ 0.42
RARAP10276 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 KRT18P27-201ENST00000427733 1299 ntBASIC17.65■□□□□ 0.42
RARAP10276 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.65■□□□□ 0.42
RARAP10276 HNRNPDP1-201ENST00000439535 754 ntBASIC17.65■□□□□ 0.42
RARAP10276 AC073648.2-201ENST00000510116 352 ntBASIC17.65■□□□□ 0.42
RARAP10276 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 AC006557.2-201ENST00000592985 1240 ntBASIC17.65■□□□□ 0.42
RARAP10276 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.65■□□□□ 0.42
RARAP10276 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.65■□□□□ 0.42
RARAP10276 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RARAP10276 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.65■□□□□ 0.42
RARAP10276 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.65■□□□□ 0.42
RARAP10276 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RARAP10276 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RARAP10276 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.65■□□□□ 0.42
RARAP10276 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
RARAP10276 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RARAP10276 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RARAP10276 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RARAP10276 PI4KAP1-204ENST00000612579 1703 ntBASIC17.64■□□□□ 0.41
RARAP10276 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RARAP10276 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.64■□□□□ 0.41
RARAP10276 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RARAP10276 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.64■□□□□ 0.41
RARAP10276 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RARAP10276 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RARAP10276 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RARAP10276 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.64■□□□□ 0.41
RARAP10276 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.64■□□□□ 0.41
RARAP10276 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.64■□□□□ 0.41
RARAP10276 AC073621.1-201ENST00000392730 636 ntBASIC17.64■□□□□ 0.41
RARAP10276 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.64■□□□□ 0.41
RARAP10276 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.64■□□□□ 0.41
RARAP10276 FAM197Y8-203ENST00000450145 560 ntBASIC17.64■□□□□ 0.41
RARAP10276 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RARAP10276 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.64■□□□□ 0.41
RARAP10276 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.64■□□□□ 0.41
RARAP10276 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.64■□□□□ 0.41
RARAP10276 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RARAP10276 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.64■□□□□ 0.41
RARAP10276 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RARAP10276 AL805961.1-202ENST00000641562 540 ntBASIC17.64■□□□□ 0.41
RARAP10276 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RARAP10276 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RARAP10276 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RARAP10276 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RARAP10276 LINC00895-201ENST00000629028 1637 ntBASIC17.64■□□□□ 0.41
RARAP10276 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.64■□□□□ 0.41
RARAP10276 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RARAP10276 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.64■□□□□ 0.41
RARAP10276 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RARAP10276 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RARAP10276 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RARAP10276 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RARAP10276 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.64■□□□□ 0.41
RARAP10276 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RARAP10276 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.63■□□□□ 0.41
RARAP10276 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RARAP10276 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RARAP10276 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RARAP10276 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
RARAP10276 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RARAP10276 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RARAP10276 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.63■□□□□ 0.41
RARAP10276 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.63■□□□□ 0.41
RARAP10276 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RARAP10276 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
RARAP10276 AC079781.3-201ENST00000449110 356 ntBASIC17.63■□□□□ 0.41
RARAP10276 AC018712.1-201ENST00000455767 687 ntBASIC17.63■□□□□ 0.41
RARAP10276 AC087163.2-201ENST00000457299 853 ntBASIC17.63■□□□□ 0.41
RARAP10276 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.63■□□□□ 0.41
RARAP10276 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.63■□□□□ 0.41
RARAP10276 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RARAP10276 RN7SL510P-201ENST00000581311 263 ntBASIC17.63■□□□□ 0.41
RARAP10276 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.63■□□□□ 0.41
RARAP10276 AF228730.7-201ENST00000641842 219 ntBASIC17.63■□□□□ 0.41
RARAP10276 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms