Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 PGF-202ENST00000405431 666 ntTSL 5 BASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 GIMAP3P-201ENST00000495150 836 ntBASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 QPRT-203ENST00000562473 579 ntTSL 3 BASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 AC104794.3-201ENST00000566840 1248 ntBASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 IFT20-216ENST00000588477 774 ntTSL 5 BASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC22.08■■□□□ 1.13
CSB-PGBD3P0DP91 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CSB-PGBD3P0DP91 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CSB-PGBD3P0DP91 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CSB-PGBD3P0DP91 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC22.08■■□□□ 1.12
CSB-PGBD3P0DP91 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CSB-PGBD3P0DP91 AC108860.2-201ENST00000562760 2183 ntBASIC22.08■■□□□ 1.12
CSB-PGBD3P0DP91 STX3-203ENST00000529177 1571 ntTSL 2 BASIC22.08■■□□□ 1.12
CSB-PGBD3P0DP91 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 DGCR5-201ENST00000399539 862 ntBASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 WDR53-204ENST00000433160 887 ntTSL 5 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 INE1-201ENST00000456273 945 ntBASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 BANF1P1-201ENST00000553684 263 ntBASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 AC116353.5-201ENST00000638148 1699 ntBASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSB-PGBD3P0DP91 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 AC098859.1-201ENST00000502915 1238 ntBASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 AL079307.3-201ENST00000556114 283 ntBASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 AC010336.2-201ENST00000564226 506 ntBASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC22.06■■□□□ 1.12
CSB-PGBD3P0DP91 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 AP006294.1-201ENST00000415407 339 ntBASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 RN7SL752P-201ENST00000463779 287 ntBASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 IGHV3-72-202ENST00000621503 303 ntBASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms