Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.27□□□□□ -0.77
APOBP04114 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
APOBP04114 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOBP04114 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOBP04114 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
APOBP04114 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.27□□□□□ -0.77
APOBP04114 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC10.27□□□□□ -0.77
APOBP04114 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
APOBP04114 HIST3H2BA-201ENST00000436555 524 ntBASIC10.27□□□□□ -0.77
APOBP04114 KRT18P34-201ENST00000488218 1270 ntBASIC10.27□□□□□ -0.77
APOBP04114 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC10.27□□□□□ -0.77
APOBP04114 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC10.27□□□□□ -0.77
APOBP04114 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
APOBP04114 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOBP04114 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
APOBP04114 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOBP04114 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC10.27□□□□□ -0.77
APOBP04114 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOBP04114 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.27□□□□□ -0.77
APOBP04114 FST-202ENST00000396947 2538 ntTSL 5 BASIC10.27□□□□□ -0.77
APOBP04114 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC10.27□□□□□ -0.77
APOBP04114 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
APOBP04114 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
APOBP04114 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
APOBP04114 AC074044.1-201ENST00000609673 707 ntBASIC10.27□□□□□ -0.77
APOBP04114 AC005702.4-201ENST00000618393 416 ntBASIC10.27□□□□□ -0.77
APOBP04114 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOBP04114 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOBP04114 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC10.27□□□□□ -0.77
APOBP04114 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
APOBP04114 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.26□□□□□ -0.77
APOBP04114 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC10.26□□□□□ -0.77
APOBP04114 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 GPAA1P2-201ENST00000417923 928 ntBASIC10.26□□□□□ -0.77
APOBP04114 MEP1AP4-201ENST00000423244 1087 ntBASIC10.26□□□□□ -0.77
APOBP04114 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC10.26□□□□□ -0.77
APOBP04114 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 AC004461.2-201ENST00000629517 803 ntBASIC10.26□□□□□ -0.77
APOBP04114 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 AC090164.3-201ENST00000610780 2143 ntBASIC10.26□□□□□ -0.77
APOBP04114 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
APOBP04114 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
APOBP04114 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
APOBP04114 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC10.26□□□□□ -0.77
APOBP04114 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
APOBP04114 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC10.26□□□□□ -0.77
APOBP04114 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
APOBP04114 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC10.26□□□□□ -0.77
APOBP04114 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC10.26□□□□□ -0.77
APOBP04114 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC10.26□□□□□ -0.77
APOBP04114 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC10.26□□□□□ -0.77
APOBP04114 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC10.26□□□□□ -0.77
APOBP04114 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC10.26□□□□□ -0.77
APOBP04114 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC10.26□□□□□ -0.77
APOBP04114 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC10.26□□□□□ -0.77
APOBP04114 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC10.26□□□□□ -0.77
APOBP04114 RRP7BP-205ENST00000566851 833 ntBASIC10.26□□□□□ -0.77
APOBP04114 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC10.26□□□□□ -0.77
APOBP04114 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC10.26□□□□□ -0.77
APOBP04114 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC10.26□□□□□ -0.77
APOBP04114 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC10.26□□□□□ -0.77
APOBP04114 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
APOBP04114 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.26□□□□□ -0.77
APOBP04114 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.26□□□□□ -0.77
APOBP04114 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 MSTO2P-201ENST00000314835 1709 ntBASIC10.26□□□□□ -0.77
APOBP04114 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 RARRES2P5-201ENST00000564013 466 ntBASIC10.26□□□□□ -0.77
APOBP04114 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC10.26□□□□□ -0.77
APOBP04114 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 SIGLEC29P-201ENST00000599873 1114 ntBASIC10.26□□□□□ -0.77
APOBP04114 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
APOBP04114 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOBP04114 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 HNRNPA1P48-201ENST00000562726 1377 ntBASIC10.25□□□□□ -0.77
APOBP04114 GGT4P-201ENST00000623672 1708 ntBASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms