Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 MIR1199-201ENST00000621445 119 ntBASIC15.87■□□□□ 0.13
SNX4O95219 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.87■□□□□ 0.13
SNX4O95219 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.87■□□□□ 0.13
SNX4O95219 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.87■□□□□ 0.13
SNX4O95219 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SNX4O95219 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.87■□□□□ 0.13
SNX4O95219 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX4O95219 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.87■□□□□ 0.13
SNX4O95219 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNX4O95219 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX4O95219 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX4O95219 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNX4O95219 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNX4O95219 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNX4O95219 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNX4O95219 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 AC097637.2-201ENST00000624096 1997 ntBASIC15.86■□□□□ 0.13
SNX4O95219 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SNX4O95219 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.86■□□□□ 0.13
SNX4O95219 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.86■□□□□ 0.13
SNX4O95219 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.86■□□□□ 0.13
SNX4O95219 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.86■□□□□ 0.13
SNX4O95219 AC004706.3-202ENST00000621574 984 ntBASIC15.86■□□□□ 0.13
SNX4O95219 AC116407.3-201ENST00000623905 1129 ntBASIC15.86■□□□□ 0.13
SNX4O95219 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.86■□□□□ 0.13
SNX4O95219 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.86■□□□□ 0.13
SNX4O95219 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNX4O95219 AC022188.1-201ENST00000620960 1664 ntBASIC15.86■□□□□ 0.13
SNX4O95219 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SNX4O95219 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.86■□□□□ 0.13
SNX4O95219 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.85■□□□□ 0.13
SNX4O95219 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SNX4O95219 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.85■□□□□ 0.13
SNX4O95219 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.85■□□□□ 0.13
SNX4O95219 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SNX4O95219 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.85■□□□□ 0.13
SNX4O95219 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.85■□□□□ 0.13
SNX4O95219 ACTG1P4-201ENST00000425123 1122 ntBASIC15.85■□□□□ 0.13
SNX4O95219 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.85■□□□□ 0.13
SNX4O95219 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.85■□□□□ 0.13
SNX4O95219 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.85■□□□□ 0.13
SNX4O95219 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.85■□□□□ 0.13
SNX4O95219 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.85■□□□□ 0.13
SNX4O95219 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.85■□□□□ 0.13
SNX4O95219 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.85■□□□□ 0.13
SNX4O95219 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.85■□□□□ 0.13
SNX4O95219 AL049840.3-201ENST00000602669 611 ntBASIC15.85■□□□□ 0.13
SNX4O95219 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.85■□□□□ 0.13
SNX4O95219 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.85■□□□□ 0.13
SNX4O95219 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.85■□□□□ 0.13
SNX4O95219 IL9RP2-201ENST00000423948 1312 ntBASIC15.85■□□□□ 0.13
SNX4O95219 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX4O95219 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms