Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CSPG5O95196 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CSPG5O95196 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
CSPG5O95196 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.02■□□□□ 0.48
CSPG5O95196 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.02■□□□□ 0.48
CSPG5O95196 AC092580.3-201ENST00000430932 139 ntBASIC18.02■□□□□ 0.48
CSPG5O95196 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.02■□□□□ 0.48
CSPG5O95196 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG5O95196 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.02■□□□□ 0.48
CSPG5O95196 ALG1L8P-201ENST00000533887 760 ntBASIC18.02■□□□□ 0.48
CSPG5O95196 LINC01225-203ENST00000563550 1244 ntBASIC18.02■□□□□ 0.48
CSPG5O95196 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.02■□□□□ 0.48
CSPG5O95196 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.02■□□□□ 0.48
CSPG5O95196 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CSPG5O95196 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG5O95196 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CSPG5O95196 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CSPG5O95196 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CSPG5O95196 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CSPG5O95196 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CSPG5O95196 AC138028.4-201ENST00000564984 1845 ntBASIC18.02■□□□□ 0.47
CSPG5O95196 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.02■□□□□ 0.47
CSPG5O95196 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CSPG5O95196 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CSPG5O95196 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CSPG5O95196 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.01■□□□□ 0.47
CSPG5O95196 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG5O95196 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG5O95196 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG5O95196 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG5O95196 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.01■□□□□ 0.47
CSPG5O95196 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG5O95196 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.01■□□□□ 0.47
CSPG5O95196 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG5O95196 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG5O95196 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG5O95196 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG5O95196 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG5O95196 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSPG5O95196 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.01■□□□□ 0.47
CSPG5O95196 MEIS3P1-201ENST00000495167 958 ntBASIC18.01■□□□□ 0.47
CSPG5O95196 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.01■□□□□ 0.47
CSPG5O95196 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.01■□□□□ 0.47
CSPG5O95196 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.01■□□□□ 0.47
CSPG5O95196 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CSPG5O95196 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.01■□□□□ 0.47
CSPG5O95196 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.01■□□□□ 0.47
CSPG5O95196 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.01■□□□□ 0.47
CSPG5O95196 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
CSPG5O95196 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.01■□□□□ 0.47
CSPG5O95196 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18■□□□□ 0.47
CSPG5O95196 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18■□□□□ 0.47
CSPG5O95196 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18■□□□□ 0.47
CSPG5O95196 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18■□□□□ 0.47
CSPG5O95196 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CSPG5O95196 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CSPG5O95196 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18■□□□□ 0.47
CSPG5O95196 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18■□□□□ 0.47
CSPG5O95196 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18■□□□□ 0.47
CSPG5O95196 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSPG5O95196 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSPG5O95196 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18■□□□□ 0.47
CSPG5O95196 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CSPG5O95196 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSPG5O95196 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSPG5O95196 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CSPG5O95196 FAM207CP-201ENST00000443486 507 ntBASIC18■□□□□ 0.47
CSPG5O95196 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18■□□□□ 0.47
CSPG5O95196 MNT-208ENST00000575394 606 ntTSL 4 BASIC18■□□□□ 0.47
CSPG5O95196 AC027307.2-201ENST00000591252 911 ntBASIC18■□□□□ 0.47
CSPG5O95196 AL158211.3-201ENST00000607385 239 ntBASIC18■□□□□ 0.47
CSPG5O95196 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CSPG5O95196 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CSPG5O95196 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18■□□□□ 0.47
CSPG5O95196 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18■□□□□ 0.47
CSPG5O95196 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18■□□□□ 0.47
CSPG5O95196 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSPG5O95196 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSPG5O95196 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18■□□□□ 0.47
CSPG5O95196 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CSPG5O95196 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CSPG5O95196 AC016027.1-202ENST00000607927 1699 ntBASIC17.99■□□□□ 0.47
CSPG5O95196 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSPG5O95196 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.99■□□□□ 0.47
CSPG5O95196 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSPG5O95196 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CSPG5O95196 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CSPG5O95196 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CSPG5O95196 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSPG5O95196 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CSPG5O95196 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.99■□□□□ 0.47
CSPG5O95196 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSPG5O95196 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CSPG5O95196 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSPG5O95196 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CSPG5O95196 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.99■□□□□ 0.47
CSPG5O95196 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.99■□□□□ 0.47
CSPG5O95196 CRB3P1-201ENST00000449338 276 ntBASIC17.99■□□□□ 0.47
CSPG5O95196 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.99■□□□□ 0.47
CSPG5O95196 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms