Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST1O76090 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST1O76090 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BEST1O76090 AL139011.1-202ENST00000642063 584 ntBASIC17.57■□□□□ 0.4
BEST1O76090 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
BEST1O76090 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.57■□□□□ 0.4
BEST1O76090 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST1O76090 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BEST1O76090 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.57■□□□□ 0.4
BEST1O76090 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.56■□□□□ 0.4
BEST1O76090 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.56■□□□□ 0.4
BEST1O76090 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
BEST1O76090 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.56■□□□□ 0.4
BEST1O76090 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
BEST1O76090 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.56■□□□□ 0.4
BEST1O76090 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
BEST1O76090 CNN2P11-201ENST00000429351 262 ntBASIC17.56■□□□□ 0.4
BEST1O76090 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.56■□□□□ 0.4
BEST1O76090 AC079140.1-201ENST00000508039 487 ntBASIC17.56■□□□□ 0.4
BEST1O76090 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.56■□□□□ 0.4
BEST1O76090 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.56■□□□□ 0.4
BEST1O76090 SNHG9-202ENST00000564014 471 ntBASIC17.56■□□□□ 0.4
BEST1O76090 AC027612.4-201ENST00000605371 583 ntBASIC17.56■□□□□ 0.4
BEST1O76090 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.56■□□□□ 0.4
BEST1O76090 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.56■□□□□ 0.4
BEST1O76090 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
BEST1O76090 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
BEST1O76090 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.56■□□□□ 0.4
BEST1O76090 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST1O76090 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 WASH6P-202ENST00000359512 1437 ntBASIC17.55■□□□□ 0.4
BEST1O76090 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
BEST1O76090 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST1O76090 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST1O76090 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
BEST1O76090 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
BEST1O76090 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BEST1O76090 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST1O76090 SPDYE11-202ENST00000450699 704 ntBASIC17.55■□□□□ 0.4
BEST1O76090 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST1O76090 AC092183.1-201ENST00000469884 875 ntBASIC17.55■□□□□ 0.4
BEST1O76090 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.55■□□□□ 0.4
BEST1O76090 AP000344.2-201ENST00000512987 629 ntBASIC17.55■□□□□ 0.4
BEST1O76090 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.55■□□□□ 0.4
BEST1O76090 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BEST1O76090 AC093520.2-201ENST00000561830 333 ntBASIC17.55■□□□□ 0.4
BEST1O76090 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
BEST1O76090 SPDYE9P-201ENST00000570642 692 ntBASIC17.55■□□□□ 0.4
BEST1O76090 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST1O76090 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BEST1O76090 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BEST1O76090 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 AC021097.1-201ENST00000607902 574 ntBASIC17.55■□□□□ 0.4
BEST1O76090 SPDYE10P-202ENST00000612005 668 ntBASIC17.55■□□□□ 0.4
BEST1O76090 SPDYE8P-202ENST00000612377 668 ntBASIC17.55■□□□□ 0.4
BEST1O76090 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.55■□□□□ 0.4
BEST1O76090 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST1O76090 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.55■□□□□ 0.4
BEST1O76090 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST1O76090 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 HLA-A-202ENST00000376806 1854 ntBASIC17.54■□□□□ 0.4
BEST1O76090 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
BEST1O76090 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 AL031731.1-201ENST00000642131 2094 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms