Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 RNPS1P1-201ENST00000507437 918 ntBASIC16.06■□□□□ 0.16
PCDH7O60245 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH7O60245 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.06■□□□□ 0.16
PCDH7O60245 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDH7O60245 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDH7O60245 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.06■□□□□ 0.16
PCDH7O60245 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDH7O60245 REXO1L3P-201ENST00000622202 1288 ntBASIC16.06■□□□□ 0.16
PCDH7O60245 AL139011.1-202ENST00000642063 584 ntBASIC16.06■□□□□ 0.16
PCDH7O60245 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
PCDH7O60245 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH7O60245 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH7O60245 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH7O60245 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDH7O60245 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH7O60245 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PCDH7O60245 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
PCDH7O60245 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.05■□□□□ 0.16
PCDH7O60245 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDH7O60245 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH7O60245 DUSP5P1-201ENST00000441325 1139 ntBASIC16.05■□□□□ 0.16
PCDH7O60245 AC136632.2-201ENST00000512891 861 ntBASIC16.05■□□□□ 0.16
PCDH7O60245 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH7O60245 MPDU1-223ENST00000582151 728 ntBASIC16.05■□□□□ 0.16
PCDH7O60245 AL121912.1-201ENST00000603683 238 ntBASIC16.05■□□□□ 0.16
PCDH7O60245 MIR1199-201ENST00000621445 119 ntBASIC16.05■□□□□ 0.16
PCDH7O60245 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH7O60245 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH7O60245 AL662844.4-201ENST00000606367 2838 ntBASIC16.05■□□□□ 0.16
PCDH7O60245 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDH7O60245 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH7O60245 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH7O60245 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PCDH7O60245 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH7O60245 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH7O60245 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH7O60245 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH7O60245 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH7O60245 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
PCDH7O60245 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDH7O60245 ALOX12P2-203ENST00000570921 1945 ntBASIC16.04■□□□□ 0.16
PCDH7O60245 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH7O60245 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDH7O60245 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PCDH7O60245 AC073621.1-201ENST00000392730 636 ntBASIC16.04■□□□□ 0.16
PCDH7O60245 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH7O60245 FAM197Y8-203ENST00000450145 560 ntBASIC16.04■□□□□ 0.16
PCDH7O60245 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDH7O60245 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH7O60245 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDH7O60245 GGTLC5P-201ENST00000617623 998 ntBASIC16.04■□□□□ 0.16
PCDH7O60245 AC008735.5-201ENST00000623544 497 ntBASIC16.04■□□□□ 0.16
PCDH7O60245 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH7O60245 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms