Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.46■□□□□ 0.22
PEX1O43933 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.46■□□□□ 0.22
PEX1O43933 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PEX1O43933 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PEX1O43933 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.45■□□□□ 0.22
PEX1O43933 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.45■□□□□ 0.22
PEX1O43933 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PEX1O43933 AC126177.1-201ENST00000547829 2218 ntBASIC16.45■□□□□ 0.22
PEX1O43933 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PEX1O43933 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 KRT18P65-201ENST00000439811 1286 ntBASIC16.45■□□□□ 0.22
PEX1O43933 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.45■□□□□ 0.22
PEX1O43933 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
PEX1O43933 BNIP3P18-201ENST00000593976 575 ntBASIC16.45■□□□□ 0.22
PEX1O43933 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.45■□□□□ 0.22
PEX1O43933 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.45■□□□□ 0.22
PEX1O43933 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PEX1O43933 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.45■□□□□ 0.22
PEX1O43933 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.45■□□□□ 0.22
PEX1O43933 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PEX1O43933 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PEX1O43933 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.45■□□□□ 0.22
PEX1O43933 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PEX1O43933 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.45■□□□□ 0.22
PEX1O43933 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PEX1O43933 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PEX1O43933 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.44■□□□□ 0.22
PEX1O43933 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.44■□□□□ 0.22
PEX1O43933 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PEX1O43933 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PEX1O43933 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PEX1O43933 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PEX1O43933 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PEX1O43933 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.44■□□□□ 0.22
PEX1O43933 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.44■□□□□ 0.22
PEX1O43933 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.44■□□□□ 0.22
PEX1O43933 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.44■□□□□ 0.22
PEX1O43933 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.44■□□□□ 0.22
PEX1O43933 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.44■□□□□ 0.22
PEX1O43933 AC096582.2-201ENST00000510860 516 ntBASIC16.44■□□□□ 0.22
PEX1O43933 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.44■□□□□ 0.22
PEX1O43933 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.44■□□□□ 0.22
PEX1O43933 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
PEX1O43933 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.44■□□□□ 0.22
PEX1O43933 AL591684.3-201ENST00000605187 298 ntBASIC16.44■□□□□ 0.22
PEX1O43933 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PEX1O43933 AL031008.1-201ENST00000619963 541 ntBASIC16.44■□□□□ 0.22
PEX1O43933 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.44■□□□□ 0.22
PEX1O43933 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PEX1O43933 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.44■□□□□ 0.22
PEX1O43933 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PEX1O43933 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 KRT8P10-201ENST00000450021 1447 ntBASIC16.44■□□□□ 0.22
PEX1O43933 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PEX1O43933 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PEX1O43933 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PEX1O43933 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.43■□□□□ 0.22
PEX1O43933 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PEX1O43933 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms