Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
LDB2O43679 AC012569.1-201ENST00000591191 1524 ntBASIC16.77■□□□□ 0.28
LDB2O43679 GGT4P-201ENST00000623672 1708 ntBASIC16.77■□□□□ 0.28
LDB2O43679 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.77■□□□□ 0.28
LDB2O43679 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB2O43679 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LDB2O43679 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB2O43679 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.77■□□□□ 0.28
LDB2O43679 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB2O43679 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LDB2O43679 RPL13AP23-201ENST00000480739 586 ntBASIC16.77■□□□□ 0.28
LDB2O43679 MIR4515-201ENST00000584082 81 ntBASIC16.77■□□□□ 0.28
LDB2O43679 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
LDB2O43679 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LDB2O43679 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB2O43679 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.27
LDB2O43679 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB2O43679 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB2O43679 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LDB2O43679 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB2O43679 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LDB2O43679 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.76■□□□□ 0.27
LDB2O43679 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LDB2O43679 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.76■□□□□ 0.27
LDB2O43679 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LDB2O43679 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LDB2O43679 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
LDB2O43679 RHOQP3-201ENST00000437982 621 ntBASIC16.76■□□□□ 0.27
LDB2O43679 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.76■□□□□ 0.27
LDB2O43679 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.76■□□□□ 0.27
LDB2O43679 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.76■□□□□ 0.27
LDB2O43679 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LDB2O43679 BX640515.1-201ENST00000617215 977 ntBASIC16.76■□□□□ 0.27
LDB2O43679 AC010507.1-201ENST00000633895 436 ntBASIC16.76■□□□□ 0.27
LDB2O43679 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.76■□□□□ 0.27
LDB2O43679 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LDB2O43679 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LDB2O43679 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.76■□□□□ 0.27
LDB2O43679 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.76■□□□□ 0.27
LDB2O43679 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.76■□□□□ 0.27
LDB2O43679 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB2O43679 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.76■□□□□ 0.27
LDB2O43679 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.75■□□□□ 0.27
LDB2O43679 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.75■□□□□ 0.27
LDB2O43679 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 GGT3P-204ENST00000453783 1664 ntBASIC16.75■□□□□ 0.27
LDB2O43679 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.75■□□□□ 0.27
LDB2O43679 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.75■□□□□ 0.27
LDB2O43679 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
LDB2O43679 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.75■□□□□ 0.27
LDB2O43679 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LDB2O43679 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LDB2O43679 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LDB2O43679 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
LDB2O43679 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LDB2O43679 HMGA1P7-201ENST00000406908 502 ntBASIC16.75■□□□□ 0.27
LDB2O43679 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.75■□□□□ 0.27
LDB2O43679 AL513480.1-201ENST00000451731 511 ntBASIC16.75■□□□□ 0.27
LDB2O43679 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.75■□□□□ 0.27
LDB2O43679 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.75■□□□□ 0.27
LDB2O43679 SLC25A1P1-201ENST00000528351 927 ntBASIC16.75■□□□□ 0.27
LDB2O43679 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
LDB2O43679 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LDB2O43679 AC096734.2-201ENST00000562054 433 ntBASIC16.75■□□□□ 0.27
LDB2O43679 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.75■□□□□ 0.27
LDB2O43679 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LDB2O43679 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.75■□□□□ 0.27
LDB2O43679 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms