Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 AL592309.1-201ENST00000443127 649 ntBASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 AC013467.2-201ENST00000605472 835 ntBASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CLCF1Q9UBD9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 AC139713.2-201ENST00000641328 2723 ntBASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 RFPL4AP1-201ENST00000530883 850 ntBASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 LINC00895-201ENST00000629028 1637 ntBASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLCF1Q9UBD9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 AC092068.3-201ENST00000587894 2016 ntBASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLCF1Q9UBD9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms