Protein–RNA interactions for Protein: Q9NZC3

GDE1, Glycerophosphodiester phosphodiesterase 1, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1Q9NZC3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 KRT17P7-201ENST00000451704 1104 ntBASIC17.11■□□□□ 0.33
GDE1Q9NZC3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 AL079307.3-201ENST00000556114 283 ntBASIC17.11■□□□□ 0.33
GDE1Q9NZC3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GDE1Q9NZC3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 BANF1P1-201ENST00000553684 263 ntBASIC17.1■□□□□ 0.33
GDE1Q9NZC3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 AL359881.2-201ENST00000602973 570 ntBASIC17.1■□□□□ 0.33
GDE1Q9NZC3 AL133215.2-201ENST00000609242 977 ntBASIC17.1■□□□□ 0.33
GDE1Q9NZC3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.1■□□□□ 0.33
GDE1Q9NZC3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 AL671710.1-201ENST00000610245 2349 ntBASIC17.1■□□□□ 0.33
GDE1Q9NZC3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 AC007541.1-201ENST00000570282 1469 ntBASIC17.1■□□□□ 0.33
GDE1Q9NZC3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.1■□□□□ 0.33
GDE1Q9NZC3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.09■□□□□ 0.33
GDE1Q9NZC3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 AL132655.2-201ENST00000596276 594 ntBASIC17.09■□□□□ 0.33
GDE1Q9NZC3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDE1Q9NZC3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms