Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP3Q9BWW4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 FAM58CP-201ENST00000435741 640 ntBASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 AC004967.1-201ENST00000453589 447 ntBASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 ALG1L5P-201ENST00000482043 771 ntBASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 AL031432.2-201ENST00000566714 459 ntBASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 AL928711.1-201ENST00000570165 459 ntBASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 AC055717.3-201ENST00000622967 595 ntBASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 FRMD8P1-201ENST00000440433 1524 ntBASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 LINC02012-201ENST00000608206 1725 ntBASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP3Q9BWW4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 MIR4469-201ENST00000583919 79 ntBASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 TOP3BP1-201ENST00000420768 1380 ntBASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 AL353732.1-201ENST00000569618 1459 ntBASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 AL023806.1-201ENST00000603994 1649 ntBASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
SSBP3Q9BWW4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms