Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.39■□□□□ 0.38
CDK5RAP1Q96SZ6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
CDK5RAP1Q96SZ6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDK5RAP1Q96SZ6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 AC004461.1-201ENST00000412461 403 ntBASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 KRT18P34-201ENST00000488218 1270 ntBASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 KRT8P23-201ENST00000560090 1207 ntBASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP1Q96SZ6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 AC060834.1-201ENST00000443027 2032 ntBASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 AC079140.1-201ENST00000508039 487 ntBASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms