Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRIM43Q96BQ3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM43Q96BQ3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRIM43Q96BQ3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM43Q96BQ3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRIM43Q96BQ3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 KRT8P12-202ENST00000472924 1397 ntBASIC18.03■□□□□ 0.48
TRIM43Q96BQ3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 MIR1908-201ENST00000410394 80 ntBASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 AC108860.2-201ENST00000562760 2183 ntBASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 MIR6869-201ENST00000619434 62 ntBASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM43Q96BQ3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 KRT8P44-201ENST00000441609 1350 ntBASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM43Q96BQ3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 AL671710.1-201ENST00000610245 2349 ntBASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 AC104581.1-202ENST00000635932 2618 ntBASIC18.01■□□□□ 0.47
TRIM43Q96BQ3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms