Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 AC106820.2-201ENST00000563775 3264 ntBASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 AL355312.1-201ENST00000407115 2176 ntBASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 AC004233.3-201ENST00000607794 1269 ntBASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
U2AF1L4Q8WU68 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 AC245100.3-201ENST00000441281 285 ntBASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 AC009949.1-201ENST00000623048 1830 ntBASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 AC141586.5-201ENST00000624546 2050 ntBASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.2■□□□□ 0.66
U2AF1L4Q8WU68 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 GPR53P-205ENST00000457298 1084 ntBASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms