Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RN7SL752P-201ENST00000463779 287 ntBASIC20.19■□□□□ 0.82
SNED1Q8TER0 RNA5SP410-201ENST00000516285 106 ntBASIC20.19■□□□□ 0.82
SNED1Q8TER0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 KRT17P8-201ENST00000540749 863 ntBASIC20.19■□□□□ 0.82
SNED1Q8TER0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNED1Q8TER0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNED1Q8TER0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNED1Q8TER0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNED1Q8TER0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNED1Q8TER0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNED1Q8TER0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNED1Q8TER0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNED1Q8TER0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNED1Q8TER0 AC087499.6-201ENST00000411576 835 ntBASIC20.19■□□□□ 0.82
SNED1Q8TER0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.19■□□□□ 0.82
SNED1Q8TER0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 AC018470.1-201ENST00000624790 3129 ntBASIC20.18■□□□□ 0.82
SNED1Q8TER0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 ELK1P1-201ENST00000485699 580 ntBASIC20.18■□□□□ 0.82
SNED1Q8TER0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 SNX29P1-201ENST00000548357 1007 ntBASIC20.18■□□□□ 0.82
SNED1Q8TER0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 SRD5A3P1-201ENST00000603021 949 ntBASIC20.18■□□□□ 0.82
SNED1Q8TER0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.18■□□□□ 0.82
SNED1Q8TER0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNED1Q8TER0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNED1Q8TER0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNED1Q8TER0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNED1Q8TER0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNED1Q8TER0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNED1Q8TER0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNED1Q8TER0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNED1Q8TER0 MIR658-201ENST00000385210 100 ntBASIC20.17■□□□□ 0.82
SNED1Q8TER0 SPDYE17-201ENST00000412399 783 ntBASIC20.17■□□□□ 0.82
SNED1Q8TER0 AC098850.1-201ENST00000419919 790 ntBASIC20.17■□□□□ 0.82
SNED1Q8TER0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNED1Q8TER0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 AL589987.1-201ENST00000453380 819 ntBASIC20.17■□□□□ 0.82
SNED1Q8TER0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 AC061975.2-201ENST00000581722 295 ntBASIC20.17■□□□□ 0.82
SNED1Q8TER0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 RPSAP52-203ENST00000622976 1023 ntBASIC20.17■□□□□ 0.82
SNED1Q8TER0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNED1Q8TER0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
SNED1Q8TER0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms